Aviva RNA Seq Tool

The gene expression profile information found on this page is intended to assist researchers in identifying tissues/cell samples that express a given gene. Gene expression profile information is taken from publicly available RNA-seq analysis and does not necessarily imply appreciable amounts at the protein level in the tissue/cell samples indicated.

Gene ID:

Gene Name: SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [ Homo sapiens (human) ]



Tissue

SampleValue (FPKM)Abundance
Adipose Tissue54.50High
Adrenal Gland45.10Medium
Appendix56.40High
Bone Marrow45.50Medium
Cerebral Cortex35.50Medium
Colon61.70High
Daudi105.20High
Duodenum57.30High
Esophagus66.40High
Gallbladder74.20High
Heart Muscle59.50High
Kidney51.20High
Liver34.80Medium
Lung62.00High
Lymph Node80.40High
Ovary93.00High
Pancreas24.00Medium
Placenta70.10High
Prostate60.00High
Salivary Gland39.60Medium
Skin49.20Medium
Small Intestine54.70High
Spleen62.70High
Stomach47.40Medium
Testis49.90Medium
Thyroid Gland69.00High
Urinary Bladder86.30High
Uterus116.60High

Cell Line

SampleValue (FPKM)Abundance
A-43170.30High
A-549119.10High
AN3-CA108.40High
BEWO67.60High
CACO-277.50High
CAPAN-257.10High
EFO-21121.60High
HaCaT90.30High
HDLM-2110.10High
HEK 293141.40High
HEL82.20High
HeLa59.90High
Hep-G2120.90High
HL-60139.30High
HMC-166.50High
K-562117.10High
Karpas-70738.20Medium
MCF-782.10High
MOLT-4253.00High
NB-482.60High
NTERA-288.60High
PC-365.10High
REH153.00High
RH-30157.90High
RPMI-822681.00High
RT-4110.50High
SCLC-21H136.40High
SH-SY5Y138.10High
SiHa80.90High
SK-BR-3195.80High
SK-MEL-3079.40High
THP-197.40High
TIME77.10High
U-138 MG77.40High
U-2 OS95.30High
U-219770.60High
U-251 MG110.50High
U-266/7082.60High
U-266/8495.20High
U-698134.10High
U-87 MG76.70High
U-93774.20High
WM-115117.80High


Please go here to view list of all tissues and cell lines tested.

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Legend for all data units:

FPKM: Fragments Per Kilobase Of Exon Per Million Fragments Mapped

RNA-SEQ data for Tissues: European Molecular Biology Laboratory-The European Bioinformatics Institute (EMBL-EBI) ArrayExpress E-MTAB-1733

RNA-SEQ data for Cell Lines: NCBI BioProject