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Aviva RNA Seq Tool

The gene expression profile information found on this page is intended to assist researchers in identifying tissues/cell samples that express a given gene. Gene expression profile information is taken from publicly available RNA-seq analysis and does not necessarily imply appreciable amounts at the protein level in the tissue/cell samples indicated.

Gene ID:

Gene Name: PTPRC protein tyrosine phosphatase receptor type C [ Homo sapiens (human) ]

Tissue

SampleValue (FPKM)Abundance
Adipose Tissue7.00Low
Adrenal Gland15.40Medium
Appendix273.70High
Bone Marrow126.40High
Cerebral Cortex9.20Low
Colon22.50Medium
Daudi133.60High
Duodenum26.70Medium
Esophagus29.20Medium
Gallbladder78.40High
Heart Muscle10.90Medium
Kidney7.50Low
Liver17.30Medium
Lung61.80High
Lymph Node445.10High
Ovary5.80Low
Pancreas3.50Low
Placenta20.70Medium
Prostate9.70Low
Salivary Gland11.30Medium
Skin5.40Low
Small Intestine43.90Medium
Spleen181.90High
Stomach46.90Medium
Testis8.00Low
Thyroid Gland12.20Medium
Urinary Bladder128.90High
Uterus16.60Medium

Cell Line

SampleValue (FPKM)Abundance
A-4310.10Not detected
A-5490.00Not detected
AN3-CA0.00Not detected
BEWO0.10Not detected
CACO-20.00Not detected
CAPAN-20.00Not detected
EFO-210.20Not detected
HaCaT0.10Not detected
HDLM-20.90Not detected
HEK 2930.00Not detected
HEL86.10High
HeLa0.00Not detected
Hep-G20.00Not detected
HL-6076.70High
HMC-10.10Not detected
K-5622.10Low
Karpas-7072.00Low
MCF-70.00Not detected
MOLT-4116.30High
NB-445.50Medium
NTERA-20.10Not detected
PC-30.00Not detected
REH4.00Low
RH-300.40Not detected
RPMI-82260.20Not detected
RT-40.00Not detected
SCLC-21H0.30Not detected
SH-SY5Y0.10Not detected
SiHa0.60Not detected
SK-BR-30.10Not detected
SK-MEL-300.20Not detected
THP-162.30High
TIME0.40Not detected
U-138 MG0.00Not detected
U-2 OS0.60Not detected
U-21970.30Not detected
U-251 MG0.30Not detected
U-266/7062.20High
U-266/8459.90High
U-69876.90High
U-87 MG0.00Not detected
U-93775.40High
WM-1150.00Not detected

Please go here to view list of all tissues and cell lines tested.

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Legend for all data units:

FPKM: Fragments Per Kilobase Of Exon Per Million Fragments Mapped

RNA-SEQ data for Tissues: European Molecular Biology Laboratory-The European Bioinformatics Institute (EMBL-EBI) ArrayExpress E-MTAB-1733

RNA-SEQ data for Cell Lines: NCBI BioProject

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