Aviva RNA Seq Tool

The gene expression profile information found on this page is intended to assist researchers in identifying tissues/cell samples that express a given gene. Gene expression profile information is taken from publicly available RNA-seq analysis and does not necessarily imply appreciable amounts at the protein level in the tissue/cell samples indicated.

Gene ID:

Gene Name: ATL3 atlastin GTPase 3 [ Homo sapiens (human) ]



Tissue

SampleValue (FPKM)Abundance
Adipose Tissue21.30Medium
Adrenal Gland17.70Medium
Appendix17.20Medium
Bone Marrow7.10Low
Cerebral Cortex8.50Low
Colon16.60Medium
Daudi14.50Low
Duodenum7.80Low
Esophagus22.40Medium
Gallbladder16.60Medium
Heart Muscle5.70Low
Kidney10.60Medium
Liver9.40Low
Lung17.50Medium
Lymph Node11.90Medium
Ovary15.30Medium
Pancreas6.90Low
Placenta11.70Medium
Prostate15.70Medium
Salivary Gland9.40Low
Skin20.70Medium
Small Intestine8.90Low
Spleen14.40Medium
Stomach11.80Medium
Testis30.50Medium
Thyroid Gland20.20Medium
Urinary Bladder18.50Medium
Uterus17.10Medium

Cell Line

SampleValue (FPKM)Abundance
A-43124.70Medium
A-54926.00Medium
AN3-CA17.50Low
BEWO0.10Not detected
CACO-220.70Medium
CAPAN-238.10Medium
EFO-2133.70Medium
HaCaT15.90Low
HDLM-223.40Medium
HEK 2934.10Low
HEL15.60Low
HeLa24.50Medium
Hep-G20.10Not detected
HL-6029.50Medium
HMC-121.30Medium
K-56218.80Low
Karpas-70735.50Medium
MCF-729.90Medium
MOLT-411.20Low
NB-417.40Low
NTERA-29.60Low
PC-323.60Medium
REH24.10Medium
RH-3017.50Low
RPMI-822622.30Medium
RT-418.50Low
SCLC-21H4.50Low
SH-SY5Y10.80Low
SiHa89.00High
SK-BR-320.70Medium
SK-MEL-3029.50Medium
THP-111.70Low
TIME36.50Medium
U-138 MG56.30High
U-2 OS33.60Medium
U-219755.50High
U-251 MG20.40Medium
U-266/7011.90Low
U-266/8419.40Low
U-69827.00Medium
U-87 MG33.50Medium
U-93720.40Medium
WM-11537.00Medium


Please go here to view list of all tissues and cell lines tested.

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Legend for all data units:

FPKM: Fragments Per Kilobase Of Exon Per Million Fragments Mapped

RNA-SEQ data for Tissues: European Molecular Biology Laboratory-The European Bioinformatics Institute (EMBL-EBI) ArrayExpress E-MTAB-1733

RNA-SEQ data for Cell Lines: NCBI BioProject