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Aviva RNA Seq Tool

The gene expression profile information found on this page is intended to assist researchers in identifying tissues/cell samples that express a given gene. Gene expression profile information is taken from publicly available RNA-seq analysis and does not necessarily imply appreciable amounts at the protein level in the tissue/cell samples indicated.

Gene ID:

Gene Name: TARDBP TAR DNA binding protein [ Homo sapiens (human) ]

Tissue

SampleValue (FPKM)Abundance
Adipose Tissue64.50High
Adrenal Gland74.70High
Appendix98.20High
Bone Marrow59.70High
Cerebral Cortex65.60High
Colon78.00High
Daudi174.00High
Duodenum76.50High
Esophagus71.80High
Gallbladder69.30High
Heart Muscle58.50High
Kidney63.80High
Liver52.10High
Lung79.00High
Lymph Node116.30High
Ovary89.00High
Pancreas33.50Medium
Placenta72.30High
Prostate90.80High
Salivary Gland62.40High
Skin90.60High
Small Intestine78.30High
Spleen92.30High
Stomach69.10High
Testis77.00High
Thyroid Gland88.90High
Urinary Bladder74.70High
Uterus97.80High

Cell Line

SampleValue (FPKM)Abundance
A-431132.40High
A-549112.70High
AN3-CA85.20High
BEWO86.60High
CACO-2138.80High
CAPAN-2104.90High
EFO-2181.10High
HaCaT104.30High
HDLM-2103.90High
HEK 293143.70High
HEL142.70High
HeLa190.10High
Hep-G2140.90High
HL-60178.10High
HMC-188.00High
K-562183.20High
Karpas-70790.60High
MCF-7124.90High
MOLT-4130.40High
NB-4132.90High
NTERA-2132.00High
PC-3101.60High
REH159.50High
RH-30130.00High
RPMI-822699.60High
RT-4104.50High
SCLC-21H133.60High
SH-SY5Y111.00High
SiHa126.50High
SK-BR-389.50High
SK-MEL-3075.00High
THP-1114.40High
TIME80.70High
U-138 MG98.50High
U-2 OS132.90High
U-219780.60High
U-251 MG131.90High
U-266/7083.40High
U-266/84106.60High
U-698170.20High
U-87 MG74.00High
U-937173.10High
WM-115101.20High

Please go here to view list of all tissues and cell lines tested.

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Legend for all data units:

FPKM: Fragments Per Kilobase Of Exon Per Million Fragments Mapped

RNA-SEQ data for Tissues: European Molecular Biology Laboratory-The European Bioinformatics Institute (EMBL-EBI) ArrayExpress E-MTAB-1733

RNA-SEQ data for Cell Lines: NCBI BioProject

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