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Aviva RNA Seq Tool

The gene expression profile information found on this page is intended to assist researchers in identifying tissues/cell samples that express a given gene. Gene expression profile information is taken from publicly available RNA-seq analysis and does not necessarily imply appreciable amounts at the protein level in the tissue/cell samples indicated.

Gene ID:

Gene Name: ASTN2 astrotactin 2 [ Homo sapiens (human) ]

Tissue

SampleValue (FPKM)Abundance
Adipose Tissue2.20Low
Adrenal Gland10.20Medium
Appendix1.80Low
Bone Marrow0.10Not detected
Cerebral Cortex22.20Medium
Colon1.70Low
Daudi4.60Low
Duodenum2.20Low
Esophagus2.50Low
Gallbladder2.40Low
Heart Muscle7.00Low
Kidney4.50Low
Liver1.80Low
Lung1.60Low
Lymph Node1.60Low
Ovary2.50Low
Pancreas2.70Low
Placenta1.60Low
Prostate27.60Medium
Salivary Gland4.70Low
Skin0.70Not detected
Small Intestine3.00Low
Spleen1.30Low
Stomach1.90Low
Testis17.80Medium
Thyroid Gland1.50Low
Urinary Bladder3.40Low
Uterus2.70Low

Cell Line

SampleValue (FPKM)Abundance
A-4311.60Low
A-5498.20Low
AN3-CA4.10Low
BEWO9.80Low
CACO-25.30Low
CAPAN-22.30Low
EFO-213.90Low
HaCaT0.10Not detected
HDLM-22.20Low
HEK 2931.70Low
HEL0.50Not detected
HeLa1.90Low
Hep-G29.60Low
HL-600.20Not detected
HMC-12.80Low
K-5622.00Low
Karpas-7071.90Low
MCF-71.90Low
MOLT-41.70Low
NB-40.00Not detected
NTERA-28.10Low
PC-35.10Low
REH2.90Low
RH-3018.50Low
RPMI-82260.70Not detected
RT-47.70Low
SCLC-21H4.80Low
SH-SY5Y29.20Medium
SiHa3.90Low
SK-BR-30.40Not detected
SK-MEL-303.10Low
THP-10.30Not detected
TIME1.30Low
U-138 MG2.70Low
U-2 OS5.80Low
U-21972.30Low
U-251 MG2.10Low
U-266/704.70Low
U-266/842.70Low
U-6984.10Low
U-87 MG5.60Low
U-9370.60Not detected
WM-11516.50Low

Please go here to view list of all tissues and cell lines tested.

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Legend for all data units:

FPKM: Fragments Per Kilobase Of Exon Per Million Fragments Mapped

RNA-SEQ data for Tissues: European Molecular Biology Laboratory-The European Bioinformatics Institute (EMBL-EBI) ArrayExpress E-MTAB-1733

RNA-SEQ data for Cell Lines: NCBI BioProject

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