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Aviva RNA Seq Tool

The gene expression profile information found on this page is intended to assist researchers in identifying tissues/cell samples that express a given gene. Gene expression profile information is taken from publicly available RNA-seq analysis and does not necessarily imply appreciable amounts at the protein level in the tissue/cell samples indicated.

Gene ID:

Gene Name: ESR1 estrogen receptor 1 [ Homo sapiens (human) ]

Tissue

SampleValue (FPKM)Abundance
Adipose Tissue4.60Low
Adrenal Gland2.00Low
Appendix1.40Low
Bone Marrow0.60Not detected
Cerebral Cortex0.30Not detected
Colon0.50Not detected
Daudi0.10Not detected
Duodenum0.30Not detected
Esophagus2.10Low
Gallbladder3.40Low
Heart Muscle1.60Low
Kidney2.60Low
Liver32.70Medium
Lung2.40Low
Lymph Node3.00Low
Ovary9.40Low
Pancreas0.40Not detected
Placenta0.40Not detected
Prostate9.30Low
Salivary Gland0.50Not detected
Skin0.70Not detected
Small Intestine0.50Not detected
Spleen1.60Low
Stomach0.80Not detected
Testis3.10Low
Thyroid Gland9.80Low
Urinary Bladder2.80Low
Uterus128.90High

Cell Line

SampleValue (FPKM)Abundance
A-4310.60Not detected
A-5490.00Not detected
AN3-CA0.10Not detected
BEWO0.00Not detected
CACO-20.10Not detected
CAPAN-20.00Not detected
EFO-210.00Not detected
HaCaT0.00Not detected
HDLM-20.00Not detected
HEK 2930.00Not detected
HEL0.00Not detected
HeLa0.20Not detected
Hep-G20.00Not detected
HL-600.00Not detected
HMC-10.00Not detected
K-5620.10Not detected
Karpas-7071.90Low
MCF-752.10High
MOLT-40.10Not detected
NB-40.00Not detected
NTERA-20.00Not detected
PC-30.00Not detected
REH0.60Not detected
RH-300.00Not detected
RPMI-82260.90Not detected
RT-47.20Low
SCLC-21H0.10Not detected
SH-SY5Y0.00Not detected
SiHa0.00Not detected
SK-BR-30.40Not detected
SK-MEL-300.00Not detected
THP-10.00Not detected
TIME0.10Not detected
U-138 MG0.20Not detected
U-2 OS0.10Not detected
U-21970.10Not detected
U-251 MG0.00Not detected
U-266/703.00Low
U-266/840.50Not detected
U-6980.10Not detected
U-87 MG0.30Not detected
U-9372.50Low
WM-1150.00Not detected

Please go here to view list of all tissues and cell lines tested.

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Legend for all data units:

FPKM: Fragments Per Kilobase Of Exon Per Million Fragments Mapped

RNA-SEQ data for Tissues: European Molecular Biology Laboratory-The European Bioinformatics Institute (EMBL-EBI) ArrayExpress E-MTAB-1733

RNA-SEQ data for Cell Lines: NCBI BioProject

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