Aviva RNA Seq Tool

The gene expression profile information found on this page is intended to assist researchers in identifying tissues/cell samples that express a given gene. Gene expression profile information is taken from publicly available RNA-seq analysis and does not necessarily imply appreciable amounts at the protein level in the tissue/cell samples indicated.

Gene ID:

Gene Name: EBF1 EBF transcription factor 1 [ Homo sapiens (human) ]



Tissue

SampleValue (FPKM)Abundance
Adipose Tissue41.50Medium
Adrenal Gland3.60Low
Appendix5.80Low
Bone Marrow3.90Low
Cerebral Cortex2.10Low
Colon2.80Low
Daudi8.50Low
Duodenum2.40Low
Esophagus6.20Low
Gallbladder13.70Medium
Heart Muscle5.50Low
Kidney3.30Low
Liver0.50Not detected
Lung3.60Low
Lymph Node12.20Medium
Ovary10.20Medium
Pancreas2.40Low
Placenta14.10Medium
Prostate4.30Low
Salivary Gland2.60Low
Skin2.80Low
Small Intestine2.00Low
Spleen5.10Low
Stomach1.80Low
Testis5.70Low
Thyroid Gland4.40Low
Urinary Bladder10.40Medium
Uterus11.50Medium

Cell Line

SampleValue (FPKM)Abundance
A-4310.00Not detected
A-5490.50Not detected
AN3-CA0.00Not detected
BEWO0.00Not detected
CACO-20.00Not detected
CAPAN-20.00Not detected
EFO-210.00Not detected
HaCaT0.10Not detected
HDLM-24.60Low
HEK 2930.30Not detected
HEL0.00Not detected
HeLa3.00Low
Hep-G20.00Not detected
HL-600.00Not detected
HMC-10.40Not detected
K-5620.10Not detected
Karpas-7070.00Not detected
MCF-70.00Not detected
MOLT-40.00Not detected
NB-40.00Not detected
NTERA-21.40Low
PC-30.00Not detected
REH100.50High
RH-300.60Not detected
RPMI-82260.10Not detected
RT-40.00Not detected
SCLC-21H6.10Low
SH-SY5Y1.90Low
SiHa0.90Not detected
SK-BR-30.00Not detected
SK-MEL-300.00Not detected
THP-10.30Not detected
TIME0.00Not detected
U-138 MG9.20Low
U-2 OS2.10Low
U-219714.90Low
U-251 MG0.20Not detected
U-266/700.00Not detected
U-266/840.00Not detected
U-69810.40Low
U-87 MG6.50Low
U-9371.50Low
WM-11511.30Low


Please go here to view list of all tissues and cell lines tested.

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Legend for all data units:

FPKM: Fragments Per Kilobase Of Exon Per Million Fragments Mapped

RNA-SEQ data for Tissues: European Molecular Biology Laboratory-The European Bioinformatics Institute (EMBL-EBI) ArrayExpress E-MTAB-1733

RNA-SEQ data for Cell Lines: NCBI BioProject