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Aviva RNA Seq Tool

The gene expression profile information found on this page is intended to assist researchers in identifying tissues/cell samples that express a given gene. Gene expression profile information is taken from publicly available RNA-seq analysis and does not necessarily imply appreciable amounts at the protein level in the tissue/cell samples indicated.

Gene ID:

Gene Name: CTNNB1 catenin beta 1 [ Homo sapiens (human) ]

Tissue

SampleValue (FPKM)Abundance
Adipose Tissue70.50High
Adrenal Gland106.30High
Appendix104.90High
Bone Marrow110.90High
Cerebral Cortex90.50High
Colon122.10High
Daudi67.50High
Duodenum117.00High
Esophagus104.00High
Gallbladder127.30High
Heart Muscle84.70High
Kidney81.60High
Liver68.80High
Lung120.00High
Lymph Node80.50High
Ovary159.30High
Pancreas41.90Medium
Placenta171.60High
Prostate109.20High
Salivary Gland72.00High
Skin73.00High
Small Intestine123.10High
Spleen82.80High
Stomach73.50High
Testis65.70High
Thyroid Gland136.70High
Urinary Bladder114.40High
Uterus137.30High

Cell Line

SampleValue (FPKM)Abundance
A-43184.00High
A-549124.20High
AN3-CA140.40High
BEWO186.90High
CACO-274.90High
CAPAN-2125.60High
EFO-2184.80High
HaCaT68.10High
HDLM-265.00High
HEK 293142.90High
HEL120.60High
HeLa134.50High
Hep-G2203.70High
HL-6062.50High
HMC-158.10High
K-56285.20High
Karpas-70748.70Medium
MCF-785.30High
MOLT-443.80Medium
NB-439.60Medium
NTERA-2236.40High
PC-3103.20High
REH39.80Medium
RH-30145.60High
RPMI-822650.00Medium
RT-4224.00High
SCLC-21H72.90High
SH-SY5Y115.30High
SiHa149.80High
SK-BR-370.80High
SK-MEL-30419.90High
THP-1138.30High
TIME143.80High
U-138 MG116.10High
U-2 OS103.80High
U-219779.20High
U-251 MG136.20High
U-266/7032.70Medium
U-266/8441.40Medium
U-69868.60High
U-87 MG128.50High
U-93784.90High
WM-115199.10High

Please go here to view list of all tissues and cell lines tested.

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Legend for all data units:

FPKM: Fragments Per Kilobase Of Exon Per Million Fragments Mapped

RNA-SEQ data for Tissues: European Molecular Biology Laboratory-The European Bioinformatics Institute (EMBL-EBI) ArrayExpress E-MTAB-1733

RNA-SEQ data for Cell Lines: NCBI BioProject

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