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Aviva RNA Seq Tool

The gene expression profile information found on this page is intended to assist researchers in identifying tissues/cell samples that express a given gene. Gene expression profile information is taken from publicly available RNA-seq analysis and does not necessarily imply appreciable amounts at the protein level in the tissue/cell samples indicated.

Gene ID:

Gene Name: CLN5 CLN5 intracellular trafficking protein [ Homo sapiens (human) ]

Tissue

SampleValue (FPKM)Abundance
Adipose Tissue16.20Medium
Adrenal Gland16.50Medium
Appendix12.60Medium
Bone Marrow6.70Low
Cerebral Cortex10.40Medium
Colon14.50Medium
Daudi6.00Low
Duodenum10.30Medium
Esophagus9.50Low
Gallbladder20.90Medium
Heart Muscle9.30Low
Kidney31.40Medium
Liver11.30Medium
Lung15.50Medium
Lymph Node16.60Medium
Ovary23.90Medium
Pancreas5.60Low
Placenta16.70Medium
Prostate20.20Medium
Salivary Gland13.90Medium
Skin8.00Low
Small Intestine11.20Medium
Spleen14.60Medium
Stomach17.00Medium
Testis14.00Medium
Thyroid Gland60.80High
Urinary Bladder18.00Medium
Uterus16.20Medium

Cell Line

SampleValue (FPKM)Abundance
A-43113.60Low
A-5497.10Low
AN3-CA8.90Low
BEWO11.60Low
CACO-26.80Low
CAPAN-216.40Low
EFO-2111.20Low
HaCaT16.10Low
HDLM-213.40Low
HEK 29320.90Medium
HEL8.70Low
HeLa10.80Low
Hep-G26.70Low
HL-6011.70Low
HMC-111.90Low
K-5624.50Low
Karpas-70710.90Low
MCF-73.60Low
MOLT-49.10Low
NB-46.70Low
NTERA-25.40Low
PC-35.90Low
REH4.80Low
RH-307.90Low
RPMI-82265.60Low
RT-47.30Low
SCLC-21H3.70Low
SH-SY5Y7.00Low
SiHa7.40Low
SK-BR-37.90Low
SK-MEL-3013.80Low
THP-116.50Low
TIME10.20Low
U-138 MG7.20Low
U-2 OS5.70Low
U-21976.30Low
U-251 MG6.70Low
U-266/7016.30Low
U-266/8417.10Low
U-6987.10Low
U-87 MG21.70Medium
U-9379.50Low
WM-11516.90Low

Please go here to view list of all tissues and cell lines tested.

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Legend for all data units:

FPKM: Fragments Per Kilobase Of Exon Per Million Fragments Mapped

RNA-SEQ data for Tissues: European Molecular Biology Laboratory-The European Bioinformatics Institute (EMBL-EBI) ArrayExpress E-MTAB-1733

RNA-SEQ data for Cell Lines: NCBI BioProject

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