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Aviva RNA Seq Tool

The gene expression profile information found on this page is intended to assist researchers in identifying tissues/cell samples that express a given gene. Gene expression profile information is taken from publicly available RNA-seq analysis and does not necessarily imply appreciable amounts at the protein level in the tissue/cell samples indicated.

Gene ID:

Gene Name: CKAP4 cytoskeleton associated protein 4 [ Homo sapiens (human) ]

Tissue

SampleValue (FPKM)Abundance
Adipose Tissue13.20Medium
Adrenal Gland25.30Medium
Appendix31.70Medium
Bone Marrow56.20High
Cerebral Cortex11.30Medium
Colon49.70Medium
Daudi3.20Low
Duodenum15.20Medium
Esophagus41.60Medium
Gallbladder27.50Medium
Heart Muscle29.70Medium
Kidney14.70Medium
Liver15.00Medium
Lung18.80Medium
Lymph Node9.60Low
Ovary23.60Medium
Pancreas13.50Medium
Placenta45.20Medium
Prostate36.70Medium
Salivary Gland25.40Medium
Skin23.40Medium
Small Intestine16.30Medium
Spleen12.70Medium
Stomach45.10Medium
Testis11.90Medium
Thyroid Gland20.80Medium
Urinary Bladder36.70Medium
Uterus42.90Medium

Cell Line

SampleValue (FPKM)Abundance
A-43148.60Medium
A-54967.50High
AN3-CA78.80High
BEWO42.90Medium
CACO-228.00Medium
CAPAN-211.80Low
EFO-2164.50High
HaCaT83.10High
HDLM-22.20Low
HEK 29337.40Medium
HEL0.00Not detected
HeLa32.60Medium
Hep-G247.80Medium
HL-600.10Not detected
HMC-10.90Not detected
K-5620.40Not detected
Karpas-7076.00Low
MCF-719.30Low
MOLT-42.70Low
NB-41.30Low
NTERA-246.20Medium
PC-385.50High
REH24.60Medium
RH-3052.60High
RPMI-82264.60Low
RT-444.40Medium
SCLC-21H29.50Medium
SH-SY5Y30.00Medium
SiHa58.60High
SK-BR-335.20Medium
SK-MEL-3031.70Medium
THP-122.00Medium
TIME117.70High
U-138 MG103.40High
U-2 OS72.70High
U-219746.50Medium
U-251 MG82.30High
U-266/7018.30Low
U-266/840.10Not detected
U-69833.30Medium
U-87 MG82.40High
U-9377.20Low
WM-11598.30High

Please go here to view list of all tissues and cell lines tested.

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Legend for all data units:

FPKM: Fragments Per Kilobase Of Exon Per Million Fragments Mapped

RNA-SEQ data for Tissues: European Molecular Biology Laboratory-The European Bioinformatics Institute (EMBL-EBI) ArrayExpress E-MTAB-1733

RNA-SEQ data for Cell Lines: NCBI BioProject

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