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Aviva RNA Seq Tool

The gene expression profile information found on this page is intended to assist researchers in identifying tissues/cell samples that express a given gene. Gene expression profile information is taken from publicly available RNA-seq analysis and does not necessarily imply appreciable amounts at the protein level in the tissue/cell samples indicated.

Gene ID:

Gene Name: ZKSCAN5 zinc finger with KRAB and SCAN domains 5 [ Homo sapiens (human) ]

Tissue

SampleValue (FPKM)Abundance
Adipose Tissue3.80Low
Adrenal Gland3.80Low
Appendix4.60Low
Bone Marrow3.30Low
Cerebral Cortex5.40Low
Colon2.60Low
Daudi8.40Low
Duodenum2.60Low
Esophagus3.40Low
Gallbladder4.10Low
Heart Muscle3.20Low
Kidney3.90Low
Liver2.00Low
Lung3.80Low
Lymph Node5.00Low
Ovary5.10Low
Pancreas1.40Low
Placenta4.00Low
Prostate4.00Low
Salivary Gland2.30Low
Skin2.50Low
Small Intestine3.00Low
Spleen4.20Low
Stomach3.50Low
Testis10.50Medium
Thyroid Gland5.50Low
Urinary Bladder5.00Low
Uterus4.40Low

Cell Line

SampleValue (FPKM)Abundance
A-4315.40Low
A-5499.20Low
AN3-CA15.60Low
BEWO4.50Low
CACO-26.40Low
CAPAN-25.60Low
EFO-2110.30Low
HaCaT4.00Low
HDLM-26.00Low
HEK 2936.60Low
HEL6.30Low
HeLa6.00Low
Hep-G25.40Low
HL-609.40Low
HMC-19.00Low
K-56212.90Low
Karpas-70711.20Low
MCF-77.70Low
MOLT-412.60Low
NB-49.10Low
NTERA-29.80Low
PC-38.60Low
REH7.90Low
RH-309.50Low
RPMI-82267.10Low
RT-46.20Low
SCLC-21H8.30Low
SH-SY5Y13.00Low
SiHa9.80Low
SK-BR-37.50Low
SK-MEL-307.20Low
THP-16.10Low
TIME6.00Low
U-138 MG11.50Low
U-2 OS11.70Low
U-219710.10Low
U-251 MG7.70Low
U-266/709.80Low
U-266/8415.30Low
U-69812.70Low
U-87 MG6.60Low
U-9376.60Low
WM-11511.20Low

Please go here to view list of all tissues and cell lines tested.

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Legend for all data units:

FPKM: Fragments Per Kilobase Of Exon Per Million Fragments Mapped

RNA-SEQ data for Tissues: European Molecular Biology Laboratory-The European Bioinformatics Institute (EMBL-EBI) ArrayExpress E-MTAB-1733

RNA-SEQ data for Cell Lines: NCBI BioProject

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